Variable ORGANISM_PROFILESConst

ORGANISM_PROFILES: {
    E_COLI: {
        fragmentSize: [number, number];
        hasNucleosomes: false;
        polymeraseSpeed: 1000;
        primerLength: [number, number];
        type: "prokaryotic";
    };
    HUMAN: {
        fragmentSize: [number, number];
        hasNucleosomes: true;
        polymeraseSpeed: 50;
        primerLength: [number, number];
        type: "eukaryotic";
    };
} = ...

Pre-defined organism profiles based on biological research.

Type declaration

  • Readonly E_COLI: {
        fragmentSize: [number, number];
        hasNucleosomes: false;
        polymeraseSpeed: 1000;
        primerLength: [number, number];
        type: "prokaryotic";
    }

    E. coli (prokaryotic) replication parameters. Based on research: 1000 bp/s, 1000-2000 nt fragments, 3-10 nt primers.

    • Readonly fragmentSize: [number, number]
    • Readonly hasNucleosomes: false
    • Readonly polymeraseSpeed: 1000
    • Readonly primerLength: [number, number]
    • Readonly type: "prokaryotic"
  • Readonly HUMAN: {
        fragmentSize: [number, number];
        hasNucleosomes: true;
        polymeraseSpeed: 50;
        primerLength: [number, number];
        type: "eukaryotic";
    }

    Human (eukaryotic) replication parameters. Based on research: 50 bp/s, 100-200 nt fragments, 3-10 nt primers.

    • Readonly fragmentSize: [number, number]
    • Readonly hasNucleosomes: true
    • Readonly polymeraseSpeed: 50
    • Readonly primerLength: [number, number]
    • Readonly type: "eukaryotic"

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