Interface PromoterSearchOptions

Configuration options for promoter finding.

interface PromoterSearchOptions {
    elements?: readonly PromoterElement[];
    maxDownstreamDistance?: number;
    maxUpstreamDistance?: number;
    minElements?: number;
    minStrengthScore?: number;
}

Properties

elements? maxDownstreamDistance? maxUpstreamDistance? minElements? minStrengthScore?

Properties

Optional elements

elements?: readonly PromoterElement[]

Custom set of promoter elements to search for

Optional maxDownstreamDistance

maxDownstreamDistance?: number

Maximum distance downstream to search for promoter elements

Optional maxUpstreamDistance

maxUpstreamDistance?: number

Maximum distance upstream to search for promoter elements

Optional minElements

minElements?: number

Minimum number of elements required to constitute a promoter

Optional minStrengthScore

minStrengthScore?: number

Minimum promoter strength score to include in results

Settings

Member Visibility

Theme

On This Page

elementsmaxDownstreamDistancemaxUpstreamDistanceminElementsminStrengthScore