Interface OrganismProfile

Organism-specific parameters that affect DNA replication.

Different organisms have different replication characteristics based on their cellular organization and DNA packaging.

interface OrganismProfile {
    fragmentSize: [number, number];
    hasNucleosomes: boolean;
    polymeraseSpeed: number;
    primerLength: [number, number];
    type: "prokaryotic" | "eukaryotic";
}

Properties

fragmentSize: [number, number]

Range of Okazaki fragment sizes [min, max] in nucleotides

hasNucleosomes: boolean

Whether this organism packages DNA in nucleosomes

polymeraseSpeed: number

DNA polymerase speed in base pairs per second

primerLength: [number, number]

Range of RNA primer lengths [min, max] in nucleotides

type: "prokaryotic" | "eukaryotic"

Organism type for reference